BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB009C07LP1|AL426004
(804 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1233 1555 0.0
>3x_Contig1233
Length = 4604
Score = 1555 bits (784), Expect = 0.0
Identities = 802/806 (99%), Gaps = 2/806 (0%)
Strand = Plus / Minus
Query: 1 atccatcgc-gtaaacgttgcatggtgctgctgggacacggacttgggaacggcgttcag 59
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2672 atccatcgcagtaaacgttgcatggtgctgctgggacacggacttgggaacggcgttcag 2613
Query: 60 gtgtgattttgtgagchtgtgagaattgggacgccgtagtattgagatgcgaatatatcg 119
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2612 gtgtgattttgtgagcttgtgagaattgggacgccgtagtattgagatgcgaatatatcg 2553
Query: 120 tttcgttagaggcacgtccttgtatgaaatcgtctgccttagaaggagtgtcaaatttcc 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2552 tttcgttagaggcacgtccttgtatgaaatcgtctgccttagaaggagtgtcaaatttcc 2493
Query: 180 tgtaggaaaggtttctacggccttcgacgtagcttttgcaatcggcccagttggtaaaca 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2492 tgtaggaaaggtttctacggccttcgacgtagcttttgcaatcggcccagttggtaaaca 2433
Query: 240 ctttgtttggtactgagctgtcactacttctcaccgcatagaatgaggaagatgaaggtg 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2432 ctttgtttggtactgagctgtcactacttctcaccgcatagaatgaggaagatgaaggtg 2373
Query: 300 gtggtggtggcgctgccgctgctgctgctgcttttgagtggtaattactataggagctgt 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2372 gtggtggtggcgctgccgctgctgctgctgcttttgagtggtaattactataggagctgt 2313
Query: 360 gactgttgtagggtgcttggttgtaagtagattgctgatggcctccgtagtgcccgtaac 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2312 gactgttgtagggtgcttggttgtaagtagattgctgatggcctccgtagtgcccgtaac 2253
Query: 420 tggaccctgaactggatccagaatacgacctgtaggatttggacgatgtagatgggaatg 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2252 tggaccctgaactggatccagaatacgacctgtaggatttggacgatgtagatgggaatg 2193
Query: 480 agtgtcctgagctactgctgctgttggcaaatgctctagcttc-cgctggcgtatcgaat 538
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 2192 agtgtcctgagctactgctgctgttggcaaatgctctagcttcgcgctggcgtatcgaat 2133
Query: 539 cgtttaaacttcgcgttcgagtaaccgtttactgattcttgacattcagaccatgaatcg 598
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2132 cgtttaaacttcgcgttcgagtaaccgtttactgattcttgacattcagaccatgaatcg 2073
Query: 599 aaaacacccacgtttctgccatttgcaacggcatagtagcctttcttacccatagttatt 658
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2072 aaaacaccaacgtttctgccatttgcaacggcatagtagcctttcttacccatagttatt 2013
Query: 659 acagatagacgtggagcctgcacctttgaatcacagactttggcagtctttgcttgttgt 718
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2012 acagatagacgtggagcctgcacctttgaatcacagactttggcagtctttgcttgttgt 1953
Query: 719 agtgttgtgttcgtttaaggcatttctagtaagtagttgacattagacgacatttcgttg 778
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1952 agtgttgtgttcgtttaaggcatttctagtaagtagttgacattagacgacatttcgttg 1893
Query: 779 gaatttaatatttgtaaatacacaat 804
||||||||||||||||||||||||||
Sbjct: 1892 gaatttaatatttgtaaatacacaat 1867
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4884
Number of Sequences: 1807
Number of extensions: 4884
Number of successful extensions: 192
Number of sequences better than 1.0e-20: 1
length of query: 804
length of database: 10,358,551
effective HSP length: 16
effective length of query: 788
effective length of database: 10,329,639
effective search space: 8139755532
effective search space used: 8139755532
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)